BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H12SP1|AL425952
(826 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1659 1588 0.0
>3x_Contig1659
Length = 17570
Score = 1588 bits (801), Expect = 0.0
Identities = 824/828 (99%), Gaps = 4/828 (0%)
Strand = Plus / Plus
Query: 1 tctctagcatgggtactattccatcgatgatcacgttcatgtagggtcttatacctagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3655 tctctagcatgggtactattccatcgatgatcacgttcatgtagggtcttatacctagga 3714
Query: 61 aagttgcaacgcatagatcttcgaattggctgaacgcctgggtgtgttggctaccgccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3715 aagttgcaacgcatagatcttcgaattggctgaacgcctgggtgtgttggctaccgccca 3774
Query: 121 tgactttgaccatctcttttgttagcttgaagggcacggcttcgaatttcactcccccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3775 tgactttgaccatctcttttgttagcttgaagggcacggcttcgaatttcactcccccag 3834
Query: 181 gcacgatatcgaatataaaaccgaaatcaatgtgtagacaatggccctgtgagtcgtaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3835 gcacgatatcgaatataaaaccgaaatcaatgtgtagacaatggccctgtgagtcgtaca 3894
Query: 241 tgatattaccgttgtgtctatccttgaattgtagtaggtaggagatgacgctgtaag--g 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3895 tgatattaccgttgtgtctatccttgaattgtagtaggtaggagatgacgctgtaagcgg 3954
Query: 299 ctaaggatttcacgaagttgtttcttgctctttggaattcaatggtactctcgttaccga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3955 ctaaggatttcacgaagttgtttcttgctctttggaattcaatggtactctcgttaccga 4014
Query: 359 atttactgatgaaatattcgtataatccattcacagcttcacggcctaacatgtctcttg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4015 atttactgatgaaatattcgtataatccattcacagcttcacggcctaacatgtctcttg 4074
Query: 419 atatggagtctggtaagacgtcgatgacaccgcaccctggtgcagtggcagtgactctgt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4075 atatggagtctggtaagacgtcgatgacaccgcaccctggtgcagtggcagtgactctgt 4134
Query: 479 aggggaagacgtacacgtctagtccgatgtgtgaccaaatggatctgaacaaagagatca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4135 aggggaagacgtacacgtctagtccgatgtgtgaccaaatggatctgaacaaagagatca 4194
Query: 539 gttgtaacgccaacacgtcttgtctacaatcgtcaccaactttgaaaatggcactctgcc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4195 gttgtaacgccaacacgtcttgtctacaatcgtcaccaactttgaaaatggcactctgcc 4254
Query: 599 atttctcctcagaatcgtcctttttcactctgaacgtggcgcatgaagggagccttggca 658
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4255 atttctcctcagaatcgtcctttttcactctgaacgtggc-catgaagggagccttggca 4313
Query: 659 tgcgcattgtaaaggcttaccgctctttctgtcgatatcaacgacaattccatctggatt 718
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4314 tgcg-attgtaaaggcttaccgctctttctgtcgatatcaacgacaattccatctggatt 4372
Query: 719 gcttggcaagtagacgtccttctgaactacaatcttactcatctcttcgtcaattttggc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4373 gcttggcaagtagacgtccttctgaactacaatcttactcatctcttcgtcaattttggc 4432
Query: 779 tttcttctccgcctttgtcttcttgatgtaaggtttcaatttaccaga 826
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4433 tttcttctccgcctttgtcttcttgatgtaaggtttcaatttaccaga 4480
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4835
Number of Sequences: 1807
Number of extensions: 4835
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 826
length of database: 10,358,551
effective HSP length: 16
effective length of query: 810
effective length of database: 10,329,639
effective search space: 8367007590
effective search space used: 8367007590
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)